Science for Everyone

Rockweed Working Group update

I attended the Rockweed Working Group's meeting on Wednesday, April 1, 2015 in Bangor, ME. The Rockweed Working Group is made up of 5 scientists who are volunteering their time help determine how this brown algae should be managed within the Department of Marine Resources (DMR) fisheries management plans before rockweed harvesting takes off as a larger commercial industry. The group has been charged with providing recommendations to DMR about areas that should be designated as closures and prohibit rockweed harvesting. Portions of the coast or islands can only be designated as closures if doing so protects "sensitive" wildlife areas, as determined and justified by scientific evidence. The group has already reviewed the justification for restricting harvesting in specific areas along the coast of Maine during certain times of year to protect declining populations of shore birds. The Maine Department of Inland Fisheries and Wildlife tracks changes in bird populations along the coast, and provided data to help the working group determine timing and location of these closures.

Smooth periwinkle snails often hang out on clumps of rockweed where they can be easily mistaken for the air bladders that help the brown algae float in the ocean for maximum photosynthesis.

Smooth periwinkle snails often hang out on clumps of rockweed where they can be easily mistaken for the air bladders that help the brown algae float in the ocean for maximum photosynthesis.

At Wednesday's meeting, the discussion focused on whether Harbor and Gray seals should be classified as sensitive species, and if yes, whether their habitat should be considered for closure. Populations of seals seem to be doing well and so it was challenging to determine whether or not pupping ledges should be closed to rockweed harvesting during pupping season. The Marine Mammal Protection Act  does prohibit individuals from changing the behavior of a marine mammal and so, in a sense, the Federal MMPA would already prohibit rockweed harvesting in any areas that are close enough to disrupts seals. Dr. Brian Beal also presented a literature review of the impact of rockweed harvesting on invertebrates. He concluded that the current evidence from research does not show a major impact of harvesting on intertidal invertebrates; however, more studies need to be done. 

A segment of the meeting was dedicated to figuring out how the Working Group will address intertidal habitat that is owned by or adjacent to conserved lands. A resolution on this issue was not reached. I used this agenda item as an opportunity to follow up on a letter I had submitted last week on behalf of Hurricane Island (see the letter here) and asked that the Working Group consider the intertidal habitat owned or used by field stations and marine labs for educational and scientific purposes to be closed to commercial harvest. The members of the group were extremely receptive to this idea and so I am working to gather the latitudinal and longitudinal coordinates for the areas that should be closed. Once this information has been gathered, I will submit it to DMR for consideration along with the Working Group's recommendations. 

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Mushroom Cultivation Workshop

On Saturday March 28, 2015, Phoebe and I attended a workshop where we learned how to prepare and inoculate hardwood logs in order to cultivate Shiitake and Oyster mushrooms. The workshop was led by Aaron Englander, Farm Manager of Erickson Fields Preserve, and hosted at Aldermere Farm in Rockport, ME.

the lighter colored wood is the sapwood. 4-6" diameter logs have the most sapwood which is softer and better for the mycelium of the mushrooms to digest

the lighter colored wood is the sapwood. 4-6" diameter logs have the most sapwood which is softer and better for the mycelium of the mushrooms to digest

Shiitake and Oyster mushrooms are saprophytes, which means they feed on dead tissue as opposed to mycorrhizal fungi, which have symbiotic associations with living trees. This means that in the wild these mushrooms like to colonize old dead logs and gain energy by digesting the cellulose of the cambium or sapwood (the lighter colored wood surrounding the darker core, or heartwood), forming a dense mycelium (the vegetative structure of the fungus) network in the log before fruiting out.

The basic idea behind outdoor log mushroom cultivation is to create an environment where mushrooms have food, plenty of moisture to keep them alive and help them process food, and shade to keep them moist/from drying out. Also, we want to decrease the amount of competition from other decomposers by minimizing opportunities for those competitors to enter the log.

A look at the spawn plugs which are set into the hardwood logs

A look at the spawn plugs which are set into the hardwood logs

The process of preparing and inoculating logs is the most labor intensive part of growing mushrooms. The first step is selecting the right logs to use. The logs we worked with during the workshop were red oak for the shiitake mushrooms, and sugar maple for the oyster mushrooms. Shiitake mushrooms have traditionally been cultivated on oak trees, whereas oyster mushrooms are a little easier to grow on a variety of hardwood logs. Logs should be 4-6" in diameter, and be freshly cut right around this time of year, when the sap in trees is flowing and the moisture content of the logs is high. From mid-spring to early fall, trees are in growing mode, and all of the moisture is in the leaves, which isn't good for growing mushrooms. We worked with 4-foot log sections. Every place where you have to limb off a branch from the log (or generally create a break in the bark) is a vulnerable place where competing fungi might try to take over that log, so ideally avoid log sections with lots of limbs. After carefully cutting logs from healthy trees they should be stored for 2-4 weeks to get rid of the natural tannins and other secondary compounds that are the tree's natural defense against fungi.

The drilling station

The drilling station

After selecting the logs, there are 4 major steps to prepare and inoculate the logs to grow mushrooms:

Adding the spawn plugs to the logs.

Adding the spawn plugs to the logs.

  1. The first step is to clean off the logs: we used wire brushes to clean off the moss, lichens, and other exterior fungi that might be growing on the outside of the log. The bark is the best natural defense against competing fungi, so gently clean off the logs, but avoid breaking the bark. 
  2. The next step is to measure and drill holes in the logs to hold the mushroom spawn plugs. Using a 5/16" drill bit, drill a row of holes 6" apart and 1¼" deep. Space rows about 2" apart, and offset/stagger the rows to form a diamond pattern around the log. 
  3. The third step requires a hammer, mushroom spawn plugs (we used plugs from the Oyster Creek Mushroom Company in Damariscotta, ME), and a bolt to help sink the plugs into the log. The plugs are approximately 1" long, so after hammering them into the drill holes, take a bolt to help drive the plugs into the log so there is a 1/4" space between the top of the plug and the outside edge of the log. 
  4. Finally, all of the drill holes and any limbed off branch sections of the logs need to be sealed with paraffin wax to protect them from invading fungi. After melting the paraffin wax in a double boiler, you can simply paint a wax seal over the drill holes to protect the mushroom spawn.
Crib-stacked finished logs (the light patches are where the drill holes have been sealed with paraffin wax) The ends have been labeled with the type of mushroom, type of log, and date

Crib-stacked finished logs (the light patches are where the drill holes have been sealed with paraffin wax) The ends have been labeled with the type of mushroom, type of log, and date

After the logs have been prepared, they can be crib-stacked and stored in a moist, shady, and well ventilated area for 6 months. During this time, the spawn will slowly start to digest the cellulose in the log and form a mycelium network in the log before fruiting out! Prepared logs should last between 3-6 years depending on the type of hardwood, and mushrooms will naturally fruit out every spring and fall, yielding about a pound of mushrooms per log. We are excited to set up some shiitake and oyster mushroom logs on Hurricane Island to add to the locally grown food we eat on the island, so stay tuned for more mushroom updates. Thanks to Aaron for such an engaging and informative workshop!

Finally, if you are super excited about growing your own mushrooms, here are some great resources with more detailed information. Happy reading and experimenting!

Other online resources and fact sheets:

Books:

  • Paul Stamets: Growing Gourmet and Medicinal Mushrooms
  • Mary Ellen Kozak & Joe Krawczyk: Growing Shiitake Mushrooms in a Continental Climate
  • J.S. Chilton and Paul Stamets: The Mushroom Cultivator
  • Perter Oei: Mushroom Cultivation
  • Bob Harris: Growing Wild Mushrooms
  • Greg A. Marley: Mushrooms for Health: Medicinal Secrets of Northeastern Fungi
  • Tradd Cotter: Organic Mushroom Farming and Mycoremediation--Simple to Advanced and Experimental Techniques for Indoor and Outdoor Cultivation

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Maine Science Festival: Climate Change Panel

On Saturday, March 21st, 2015, I participated on a panel about climate change in Maine at the first Maine Science Festival, which was a fantastic event that drew 10,000 people of all ages to interact with science through presentations, workshops, and other events. The panel was moderated by Linda Silka, the former Director of the Margaret Chase Smith Policy Center and a Professor in the School of Economics. Our panel group opened with an overview of climate change in Maine by Dr. Ivan Fernandez. He is a professor at the University of Maine in the forestry department and the Climate Change Institute and he played a significant role in writing the 2009 Maine's Climate Future report and the 2015 update, the culmination of a voluntary effort undertaken by a number of researchers in Maine at the request of Governor Baldacci. 

 Dr. Mathew Chatfield, an assistant professor of conservation biology at Unity College, followed Dr. Fernandez's talk. Dr. Chatfield studies amphibians and reptiles and he focused his presentation on talking about the challenges certain species with narrow ecological niches face as temperatures increase and precipitation patterns change; those species face real barriers to survival.  

One of my presentation slides

One of my presentation slides

My presentation focused on evidence of warming water temperatures and ocean acidification, and the ecological and socioeconomic implications these changes have for important species in the Gulf of Maine. Scientists at the Gulf of Maine Research Institute believe the Gulf of Maine is warming faster than 99% of the world's ocean. Others in the state have attributed the lack of the Northern shrimp (Pandalus borealis) fishery, which is closed for the second season in a row, to warmer water temperatures altering the timing of the spring phytoplankton bloom and the release of shrimp eggs into the water column. The two events used to be synchronized so that larval shrimp could maximize feeding on the ready supply of phytoplankton; however, the timing of each event has shifted due to changes in water temperature. The result is that shrimp larvae are not getting the nutrition they need to survive. I also pointed to other examples of changes in the marine system, including the range expansion of black sea bass and the devastating effects green crabs have had on valuable nursery habitats and on our clam fishery, the third most valuable commercial fishery in the state. These examples are occurring partially because of warming waters and ocean acidification.

Finally, Dr. Caroline Noblet, a professor in the School of Economics at the University of Maine, concluded the discussion by speaking about the public perception of climate change and how to tailor messaging about evidence to initiate action. Once we wrapped up our presentations, the audience asked excellent questions about how to move policy and other initiatives forward to mitigate climate change effects and how communities can adapt to changing conditions. The discussion was engaging and I left the presentation feeling encouraged that people are paying attention and thinking about solutions to this critical issue. 

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20th International Pectinid Workshop in Galway, Ireland

Conducting drop camera surveys on Muscle Ridge in 2013.

Conducting drop camera surveys on Muscle Ridge in 2013.

I booked my flight to Shannon, Ireland on St. Patrick's Day! In early March 2015, I found out that two abstracts I submitted on behalf of the scallop project team were accepted to be presented at the 20th International Pectinid Workshop in Galway, Ireland. The workshop has been organized around several themes including general scallop ecology and biology, aquaculture, fisheries management, and marine protected areas. The event will bring together scientists, managers, and others who work on scallop fisheries research. It provides an amazing opportunity to build my foundational knowledge on scallop biology, plus get some helpful hints on how to improve our project or other potential analyses to do to understand the effectiveness of small-scale closures in rebuilding the resident scallop population. I also have the opportunity to co-chair the plenary session - Marine Protected Areas with marine ecologist and fisheries biologist, Bryce Beukers-Stewart.

My oral presentation will be entitled, "The effect of small-scale closed areas on giant sea scallop populations in Maine" and the poster will focus on the collaborative project approach including lessons learned through working with a diverse group of fishermen, managers, and scientists. I am looking forward to writing additional blog posts to share what I learn while at the workshop. 

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Building Passive Drifters to Monitor Ocean Currents

This year the Eastern Maine Skippers Program students had a chance to build passive drifters with the help of Jim Manning (NOAA) and Cassie Stymiest (NERACOOS). Deploying passive drifters enables researchers to get a better sense of broad current patterns in different parts of the ocean, which is relevant to plankton researchers, teams reacting to oil spills, search and rescue teams, and other oceanographers. 

Passive Drifter track lines from drifters that are currently pinging out GPS locations

Passive Drifter track lines from drifters that are currently pinging out GPS locations

There are several examples where knowledge of currents from passive drifter data enabled teams to react and mitigate accidents. One significant incident occurred in March of 2011, when the Hooksett Wastewater Treatment Plant (Hooksett, NH) accidentally released several million small gridded plastic disks into the Merrimack River. These disks subsequently washed up along the coast of New Hampshire, Massachusetts, and Southern Maine. When the incident occurred, New Hampshire was able to ask for a model from the data collected by previous passive drifters to predict where the disks would end up. 

Another accidental passive drifter story happened in May of 1990 when 61,000 Nike shoes were released from a shipping container in the North Pacific. This was the largest (albeit accidental) release of drifters, and oceanographers were actually able to validate some of the models by looking at the data from where shoes were washing up. 

One of the reasons it is helpful to keep building, deploying, and tracking drifters from different locations is to add more data to oceanographic models. Although individual drifter paths at first glance seem to have a lot of variability, by averaging their collective movements scientists can gain a more accurate understanding of oceanographic patterns. Our ocean circulation is not fixed, and especially in the context of a changing climate it is important to see how the oceans are responding to warming waters and different wind patterns. 

Building passive drifters is simple and fun! The following are the main assembly steps that the skippers worked on during this workshop:

  1. Cutting and gluing the canvas sails
  2. Attaching grommets to the sails
  3. Assembling the central metal mast
  4. Assembling the mount to hold the GPS transmitter

The final step will be for students to attach the GPS transmitters to their drifters and deploying them so we can track their movements in Penobscot Bay!

We are also looking forward to helping out the drifter dataset by deploying a passive drifter during our Marine Biology program on Hurricane Island! Stay tuned! Want to set up and deploy your own passive drifter? Check out StudentDrifters.org

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